BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B04SP1|AL428000
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1428 1677 0.0
>3x_Contig1428
Length = 9146
Score = 1677 bits (839), Expect = 0.0
Identities = 873/889 (98%), Gaps = 2/889 (0%)
Strand = Plus / Plus
Query: 1 tggaaagtgcaaaaaaaacaaaataaagaaaaaaragccagttatcagcatgagctttcc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2881 tggaaagtgcaaaaaaaacaaaataaagaaaaaagagccagttatcagcatgagctttcc 2940
Query: 61 tttcggatatgacatcacttggcctatggatcctagtatcatgtatatctcggggagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2941 tttcggatatgacatcacttggcctatggatcctagtatcatgtatatctcggggagagc 3000
Query: 121 ctcaacgctcggcatctggaattgatttcctactaccggctgggaggccttattgaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3001 ctcaacgctcggcatctggaattgatttcctactaccggctgggaggccttattgaatat 3060
Query: 181 tcttaccccttcaaaggggcccagataatrccgtaataatcggttttaggaactsggaat 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 3061 tcttaccccttcaaaggggcccagataatgccgtaataatcggttttaggaactgggaat 3120
Query: 241 cacgtgatgtcacgtgattcccagttcacgtaaatvatattcctctttcctttacctaca 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3121 cacgtgatgtcacgtgattcccagttcacgtaaatgatattcctctttcctttacctaca 3180
Query: 301 ggttatggcatttacactatatcctgtatagaacaaggcgttgtttattttgcagcacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3181 ggttatggcatttacactatatcctgtatagaacaaggcgttgtttattttgcagcacag 3240
Query: 361 agcacgacatgtagccgatagccagcactgtcagccaattttactcaacttctcatggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3241 agcacgacatgtagccgatagccagcactgtcagccaattttactcaacttctcatggat 3300
Query: 421 gctttgaagcaacgacatttgaagttgctgtacaggcagcgtggtatgtgcttcaagaac 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 3301 gctttgaagcaacgacatttgaagttgctgtacaggcagcgtggta-gtgcttcaagaac 3359
Query: 481 tattgawtacvatgtggtaattgaaccagagttgagagaagatggcgatttggttacaga 540
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3360 tattgattacgatgtggtaattgaaccagagttgagagaagatggcgatttggttacaga 3419
Query: 541 tagtcaattgacggaacaggacgaccagagttttcctgacatacaagtaccgtctccgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3420 tagtcaattgacggaacaggacgaccagagttttcctgacatacaagtaccgtctccgga 3479
Query: 601 tcgtgttgacgatttcgatctaaatcaaggagatggtttgatggacaaggcaacggcaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3480 tcgtgttgacgatttcgatctaaatcaaggagatggtttgatggacaaggcaacggcaaa 3539
Query: 661 cgaagatgatatwtatytygttattggtgatgaggttgctgccgtaaacgcaccggtgga 720
|||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct: 3540 cgaagatgatatagatcacgtgattggtgatgaggttgctgccgtaaacgcaccggtgga 3599
Query: 721 aacatctgatcttkttatagatacgactcagtttgattcaatgactctatcacaactatc 780
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3600 aacatctgatcttgttatagatacgactcagtttgattcaatgactctatcacaactatc 3659
Query: 781 cacgccacttacgtcgatggcta-catcgatgttctgcgaagattgcttgaaactgtgat 839
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3660 cacgccacttacgtcgatggctaccatcgatgttctgcgaagattgcttgaaactgtgat 3719
Query: 840 actagtaacaawagaagaacgaacttcgcaatttaacagagctggctct 888
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 3720 actagtaacaatagaagaacgaacttcgcaatttaacagagctggctct 3768
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5532
Number of Sequences: 1807
Number of extensions: 5532
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)